The detailed information of tRNA gene sequence


Sequence ID>WENV170020158
Genome IDBBPE01003521
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 7388
End posion on genome 7462
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position
atacatagta
tRNA gene sequence
CGGGGAGTAGCGCAGCCTGGTTAGCGCGCCGCGTTCGGGACGCGGAGGTCGGAGGTTCAA
ATCCTCTCTCCCCGAttt
Downstream region at tRNA end position
atagtnnnnn
Secondary structure (Cloverleaf model)
>WENV170020158	Pro	CGG
                   a      Attt atagtnnnnn
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     T C T C C     A
    C C G A        A      + | | | |     A
  T         C G C G       G G A G G     C
  G         | | | |                 T T
  G         G C G C
    T T A          G     AGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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