The detailed information of tRNA gene sequence


Sequence ID>WENV170020164
Genome IDBBPE01003578
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 4614
End posion on genome 4538
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
aggtgcaaca
tRNA gene sequence 
CGGGGTGTAGCTTAGCCTGGTAGAGCGCTACGTTCGGGACGTAGAGGCCGGAGGTTCGAA
TCCTCTCACCCCGACCA
Downstream region at tRNA end position 
cattttcctt
Secondary structure (Cloverleaf model)
>WENV170020164	Pro	CGG
                   a      ACCA cattttcctt
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     T C T C C     A
      C G A        A      + | | | |     G
    C       T T C G       G G A G G     C
    T       + | | |                 T T
    G       G A G C
      G T A        G     AGGCC
                    C - G
                    T - A
                    A - T
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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