The detailed information of tRNA gene sequence


Sequence ID>ENV08002013
Genome IDABOK01446839
Search identical group
Phylum/Classmosquito metagenome; viral fraction from Mung bean nuclease digestion of DNA from mixed species mosquitoes collected in Mission Valley in San Diego, CA
Species
Start position on genome 83
End posion on genome 7
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
cagtgacagt
tRNA gene sequence 
GCGTCCGTAGCTCAGTTGGTTAGAGCACCACCTTGACATGGTGGGGGTCGGTGGTTCGAG
TCCACTCGGACGCACCA
Downstream region at tRNA end position 
tattgcnnnn
Secondary structure (Cloverleaf model)
>ENV08002013	Val	GAC
                   t      ACCA tattgcnnnn
                     G - C
                     C - G
                     G - C
                     T - A
                     C - G
                     C - G
                     G - C          T G
                    T     T C A C C     A
      T G A        A      + | | | |     G
    T       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    C - G
                    A - T
                    C - G
                    C - G
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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