The detailed information of tRNA gene sequence


Sequence ID>WENV170020197
Genome IDBBPE01003950
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 590
End posion on genome 500
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cggcttcgac
tRNA gene sequence 
GGACAGGTGGCCGAGCGGTCGAAGGCGCGCGCCTGGAAAGTGCGTATAGGTCAAAAGCCT
ATCGTGGGTTCGAATCCCACCCTGTCCGCCA
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170020197	Ser	GGA
                   c      GCCA nnnnnnnnnn
                     G - C
                     G - C
                     A - T
                     C - G
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TATAGGTCAAAAGCCTATC
                    C - G
                    G - C
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK