The detailed information of tRNA gene sequence


Sequence ID>WENV170020198
Genome IDBBPE01003950
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 467
End posion on genome 377
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
nnnnnnnnnc
tRNA gene sequence 
GGACAGGTGGCCGAGCGGTCGAAGGCGCGCGCCTGGAAAGTGCGTATAGGTCAAAAGCCT
ATCGTGGGTTCGAATCCCACCCTGTCCGCCA
Downstream region at tRNA end position 
gttgccctgc
Secondary structure (Cloverleaf model)
>WENV170020198	Ser	GGA
                   c      GCCA gttgccctgc
                     G - C
                     G - C
                     A - T
                     C - G
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TATAGGTCAAAAGCCTATC
                    C - G
                    G - C
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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