The detailed information of tRNA gene sequence


Sequence ID>WENV170020225
Genome IDBBPE01004402
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 4836
End posion on genome 4764
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
tttgtctagg
tRNA gene sequence 
GCCCCCGTAGCTCAATTGGTAGAGCAATTCCCTTTTAAGGAAGTGGTTCTGCGTTCGAGT
CGCGGCGGGGGCAtat
Downstream region at tRNA end position 
ttttagaata
Secondary structure (Cloverleaf model)
>WENV170020225	Lys	TTT
                   g      Atat ttttagaata
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C          T G
                    T     G G C G C     A
      T A A        A      | + | | |     G
    T       C T C G       C T G C G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     TGGTT
                    A   G
                    T - A
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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