The detailed information of tRNA gene sequence


Sequence ID>WENV170020228
Genome IDBBPE01004506
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 16316
End posion on genome 16243
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ccacagctaa
tRNA gene sequence 
GGGGCTGTAGTTCAATTGGTTAGAGCACCGCCCTGTCACGGCGGAAGTTGCGGGTTCGAG
CCCCGTCGGCCCCGttt
Downstream region at tRNA end position 
attttagcag
Secondary structure (Cloverleaf model)
>WENV170020228	Asp	GTC
                   a      Gttt attttagcag
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     G - C          C G
                    T     T G C C C     A
      T A A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | + |                 T T
    G       G A G C
      T T A        A     AAGTT
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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