The detailed information of tRNA gene sequence


Sequence ID>WENV170020230
Genome IDBBPE01004569
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 697
End posion on genome 770
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
caaggggcat
tRNA gene sequence 
ATAGTGGTAGCTCAGTCGGATAGAGCACTCGCCTGCTAAGCGAGAGGCCGCGGGTTCGAC
TCCCGCCCACTCGCttg
Downstream region at tRNA end position 
gcagggctac
Secondary structure (Cloverleaf model)
>WENV170020230	Ser	GCT
                   t      Cttg gcagggctac
                     A   G
                     T   C
                     A - T
                     G - C
                     T - A
                     G - C
                     G - C          T C
                    T     C G C C C     A
      T G A        A      | | | | |     G
    C       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     AGGCC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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