The detailed information of tRNA gene sequence


Sequence ID>WENV170020243
Genome IDBBPE01004743
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 11153
End posion on genome 11229
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aagcttcagt
tRNA gene sequence 
CGCGGGGTGGAGCAGCCTGGTAGCTCGTTGGGCTCATAACCCAAAGGTCGCAAGTTCAAA
TCTTGCCCCCGCAACCA
Downstream region at tRNA end position 
aatttgctgg
Secondary structure (Cloverleaf model)
>WENV170020243	Met	CAT
                   t      ACCA aatttgctgg
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G T T C     A
      C G A        G      | | | | |     A
    C       C G A G       G C A A G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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