The detailed information of tRNA gene sequence


Sequence ID>WENV170020246
Genome IDBBPE01004801
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 2124
End posion on genome 2214
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cgcgccttgc
tRNA gene sequence 
GGAGCGGTGGCCGAGTGGTCGAAGGCGCACGCCTGGAAAGTGTGTATAGGTCAAAAGCCT
ATCGTGGGTTCGAATCCCACCCGCTCCGCCA
Downstream region at tRNA end position 
tcaactttcc
Secondary structure (Cloverleaf model)
>WENV170020246	Ser	GGA
                   c      GCCA tcaactttcc
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TATAGGTCAAAAGCCTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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