The detailed information of tRNA gene sequence


Sequence ID>WENV170020254
Genome IDBBPE01004871
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 10359
End posion on genome 10287
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
atagtaaaac
tRNA gene sequence 
GGGGGTGTGGTGTCAATGGTAGCACAACGGTCTCCAAAACCGTTAGTCTAGGTTCGAATC
CTTGCACCCCCGCtc
Downstream region at tRNA end position 
tttatatatg
Secondary structure (Cloverleaf model)
>WENV170020254	Trp	CCA
                   c      GCtc tttatatatg
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     G T T C C     A
      A A C        G      |   | | |     G
    T       T G T G       C T A G G     C
    G       + | | |                 T T
    G       G C A C
      T A          A     TAGT
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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