The detailed information of tRNA gene sequence


Sequence ID>WENV170020258
Genome IDBBPE01004951
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 2631
End posion on genome 2555
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ccggtgacgt
tRNA gene sequence 
GGCGGCGTAGCTCAGCTGGTTAGAGCACGGCACTCATAATGCCGGGGTCACCGGTTCAAG
TCCGGTCGCCGCTACCA
Downstream region at tRNA end position 
cgcgtcccgg
Secondary structure (Cloverleaf model)
>WENV170020258	Met	CAT
                   t      ACCA cgcgtcccgg
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     T G G C C     A
      C G A        A      | | | | |     A
    T       C T C G       A C C G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    G - C
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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