The detailed information of tRNA gene sequence


Sequence ID>WENV170020266
Genome IDBBPE01005021
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 407
End posion on genome 482
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
cacaatgtat
tRNA gene sequence 
GCCCGCATAGCTCAGTTGGCAGAGCGTCGCATTCGTAACGCGAAGGCCGTGGGTTCAATT
CCTGCTGCGGGCACCA
Downstream region at tRNA end position 
gaatggatgc
Secondary structure (Cloverleaf model)
>WENV170020266	Thr	CGT
                   t      ACCA gaatggatgc
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     C - G
                     A - T          T T
                    T     C G T C C     A
      T G A        A      | + + | |     A
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     AGGCC
                    T - A
                    C - G
                    G - C
                    C - G
                    A   C
                  T       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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