The detailed information of tRNA gene sequence


Sequence ID>WENV170020268
Genome IDBBPE01005052
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 185
End posion on genome 109
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gcgggtgcga
tRNA gene sequence 
TGCGGGGTGGAGCAGTCCGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGGAGGTTCAAA
TCCTCCCCCCGCTACCA
Downstream region at tRNA end position 
agtaaaatca
Secondary structure (Cloverleaf model)
>WENV170020268	Met	CAT
                   a      ACCA agtaaaatca
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C C T C C     A
      T G A        G      | | | | |     A
    C       C G A G       G G A G G     C
    C       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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