The detailed information of tRNA gene sequence


Sequence ID>WENV170020277
Genome IDBBPE01005209
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 2390
End posion on genome 2465
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
tctctccggt
tRNA gene sequence 
GGGGTCATAGCTCAGATGGGAGAGCGCTTGAATGGCATTCAAGAGGTCCGGGGTTCGATT
CCCCGTGGCTCCACCA
Downstream region at tRNA end position 
aagcgaggcg
Secondary structure (Cloverleaf model)
>WENV170020277	Ala	GGC
                   t      ACCA aagcgaggcg
                     G - C
                     G - C
                     G + T
                     G - C
                     T + G
                     C - G
                     A - T          T T
                    T     G C C C C     A
      A G A        A      | | | | |     G
    T       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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