The detailed information of tRNA gene sequence


Sequence ID>WENV170020287
Genome IDBBPE01005410
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 1770
End posion on genome 1696
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ggtatcacca
tRNA gene sequence 
GGGCTCGTAGCTCAGTGGCAGAGCGGCCGGCTCATAACCGGTTGGTCGTAGGTTCGAATC
CTGCCGAGCCCACCA
Downstream region at tRNA end position 
ttgaatcccc
Secondary structure (Cloverleaf model)
>WENV170020287	Met	CAT
                   a      ACCA ttgaatcccc
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C          T A
                    T     C G T C C     A
        G A        A      | + | | |     G
      T     C T C G       G T A G G     C
      G     | | | |                 T T
      G     G A G C
        C A        G     TGGTC
                    G + T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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