The detailed information of tRNA gene sequence


Sequence ID>WENV170020288
Genome IDBBPE01005416
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 11252
End posion on genome 11337
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
caaacgctaa
tRNA gene sequence 
AGACAGATGGCTGAGCGGCAAAGCAACGGTCTTGAAAACCGATGTACCATTTATTTGGTC
GGTGGTTCAAATCCACCTCTGTCCGCat
Downstream region at tRNA end position 
ttggtgattt
Secondary structure (Cloverleaf model)
>WENV170020288	Ser	TGA
                   a      GCat ttggtgattt
                     A   C
                     G - C
                     A - T
                     C - G
                     A - T
                     G - C
                     A - T          T A
                    T     C C A C C     A
        G A        G      | | | | |     A
      C     G T C G       G G T G G     C
      G       | | |                 T T
      G     A A G C
        C A        A     TGTACCATTTATTTGGTC
                    A   A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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