The detailed information of tRNA gene sequence


Sequence ID>WENV170020301
Genome IDBBPE01005416
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 26241
End posion on genome 26159
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttttaaaaaa
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGCCTAAAGCGTTGGTTTGCTAAACCAAAGACGGAAACGTCCGT
GGGTTCGAATCCCACCCCCTCCAttt
Downstream region at tRNA end position 
cttttttctt
Secondary structure (Cloverleaf model)
>WENV170020301	Ser	GCT
                   a      Attt cttttttctt
                     G - C
                     G - C
                     A - T
                     G - C
                     A   C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G T G G G     C
    G         | | |                 T T
    C       A A G C
      C T A        G     AGACGGAAACGTCC
                    T - A
                    T - A
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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