The detailed information of tRNA gene sequence


Sequence ID>WENV170020309
Genome IDBBPE01005589
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 9250
End posion on genome 9323
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ccttgcacgg
tRNA gene sequence 
GGCGCGATAGCAAAGCGGTTATGCAACGGATTGCAAATCCGTCTAGCCCGGTTCGACTCC
GGGTCGCGCCTCCA
Downstream region at tRNA end position 
gttgccaggt
Secondary structure (Cloverleaf model)
>WENV170020309	Cys	GCA
                   g      TCCA gttgccaggt
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C
                     A - T          T C
                    T     G G G C C     A
        G A        A      | | | | |     G
      C     A A C G       C C C G G     C
      G       | | |                 T T
      G     A T G C
        T T        A     CTAG
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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