The detailed information of tRNA gene sequence


Sequence ID>WENV170020329
Genome IDBBPE01005870
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 520
End posion on genome 594
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttagcttcac
tRNA gene sequence 
GGCAGCGTAGCTCAGTGGTAGAGCAGGGGACTCATAAGCCCTTGGTCGTGGGTTCGAATC
CCTCCGCTGCCACCA
Downstream region at tRNA end position 
ggtccgtcat
Secondary structure (Cloverleaf model)
>WENV170020329	Met	CAT
                   c      ACCA ggtccgtcat
                     G - C
                     G - C
                     C - G
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     C T C C C     A
        G A        A      |   | | |     G
      T     C T C G       G T G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     TGGTC
                    G + T
                    G - C
                    G - C
                    G - C
                    A   G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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