The detailed information of tRNA gene sequence


Sequence ID>WENV170020352
Genome IDBBPE01006290
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 498
End posion on genome 588
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cgccagttcc
tRNA gene sequence 
GGACAGGTGGCCGAGAGGCTGAAGGCACGCGGTTGCTAACTGCGCGTGCGCCAAAAGCGC
ACCGTGGGTTCGAATCCCACCCTGTCCGCCA
Downstream region at tRNA end position 
tcgtggaaaa
Secondary structure (Cloverleaf model)
>WENV170020352	Ser	GCT
                   c      GCCA tcgtggaaaa
                     G - C
                     G - C
                     A - T
                     C - G
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      A G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        A     CGTGCGCCAAAAGCGCACC
                    C - G
                    G - C
                    C - G
                    G + T
                    G - C
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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