The detailed information of tRNA gene sequence


Sequence ID>WENV170020361
Genome IDBBPE01006412
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 108
End posion on genome 16
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position
taaaaataaa
tRNA gene sequence
GGAGAGGTCGCATAGTTGGTCTATTGCGGCACACTGCTAATGTGCTATATGGGTAAAACC
GTATCGTGGGTTCGAATCCCACCCTCTCCGCAA
Downstream region at tRNA end position
acaatcgaaa
Secondary structure (Cloverleaf model)
>WENV170020361	Ser	GCT
                   a      GCAA acaatcgaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    T T G A        C      | | | | |     G
  G         T A C G       G T G G G     C
  G           | | |                 T T
  T         T T G C
    C T A          G     TATATGGGTAAAACCGTATC
                    G - C
                    C - G
                    A - T
                    C - G
                    A - T
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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