The detailed information of tRNA gene sequence


Sequence ID>WENV170020385
Genome IDBBPE01006837
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 1762
End posion on genome 1854
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ccactcctgc
tRNA gene sequence 
GGAGGGGTGGCCGAGTGGCCGAAGGCGGCGGTTTGCTAAACCGTTAGAGGGGGATAACCC
CTCTCGTGGGTTCGAATCCCATCCCCTCCGCCA
Downstream region at tRNA end position 
gttcccatac
Secondary structure (Cloverleaf model)
>WENV170020385	Ser	GCT
                   c      GCCA gttcccatac
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T A C C C     A
      T G A        G      + | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    C       A G G C
      C G A        G     TAGAGGGGGATAACCCCTCTC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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