The detailed information of tRNA gene sequence


Sequence ID>WENV170020392
Genome IDBBPE01006907
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 1110
End posion on genome 1183
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position
tctgtcacct
tRNA gene sequence
CGCGGGGTGGAGCAGTGGAAGCTCGTCGGGCTCATAACCCGAAGGCCGTTGGTTCGAATC
CAACCCCCGCTACCn
Downstream region at tRNA end position
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170020392	Met	CAT
                   t      ACCn nnnnnnnnnn
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A A C C     A
        G A        G      | | | | |     G
      T     C G A G       G T T G G     C
      G     | | | |                 T T
      G     G C T C
        A A        G     AGGCC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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