The detailed information of tRNA gene sequence


Sequence ID>WENV170020397
Genome IDBBPE01006967
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 1045
End posion on genome 957
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
aaacatatac
tRNA gene sequence 
GGAGGGGTATCGAAGTGGTCATAACGGGGCTGACTCGAAATCAGTTTGTCGGAAACGGCA
CGCGGGTTCGAATCCCGCCCCCTCCGCCA
Downstream region at tRNA end position 
ttttaggact
Secondary structure (Cloverleaf model)
>WENV170020397	Ser	CGA
                   c      GCCA ttttaggact
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G C C C     A
    G T G A        A      | | | | |     G
  G         A G C T       G C G G G     C
  T           | | +                 T T
  C         A C G G
    A T A          G     TTGTCGGAAACGGCAC
                    G + T
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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