The detailed information of tRNA gene sequence


Sequence ID>WENV170020403
Genome IDBBPE01007044
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 5231
End posion on genome 5305
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
gaccaacggc
tRNA gene sequence 
GCTGCAGTAGCTCAGTGGTAGAGCACTCCCTTGGTAAGGGAGAGGTCGAGAGTTCAATCC
TCTCTTGCAGCACCA
Downstream region at tRNA end position 
tttcctttcg
Secondary structure (Cloverleaf model)
>WENV170020403	Thr	GGT
                   c      ACCA tttcctttcg
                     G - C
                     C - G
                     T - A
                     G - C
                     C - G
                     A - T
                     G + T          C T
                    T     C T C T C     A
        G A        A      | | | | |     A
      T     C T C G       G A G A G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     AGGTC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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