The detailed information of tRNA gene sequence


Sequence ID>WENV170020420
Genome IDBBPE01007407
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 393
End posion on genome 465
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
gcatcactct
tRNA gene sequence 
GCCCACGTAGCTCAGCTGGTAGAGCAGGGCTTTCGTAAAGCTCAGGTCGGAGGTTCAATC
CCTCTCGTGGGCTatg
Downstream region at tRNA end position 
aatgttcaag
Secondary structure (Cloverleaf model)
>WENV170020420	Thr	CGT
                   t      Tatg aatgttcaag
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     C - G
                     G - C          C T
                    T     T C T C C     A
      C G A        A      + | | | |     A
    T       C T C G       G G A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    G - C
                    G + T
                    G - C
                    C - G
                    T - A
                  T       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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