The detailed information of tRNA gene sequence


Sequence ID>WENV170020433
Genome IDBBPE01007777
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 4748
End posion on genome 4659
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position
tcagaatttt
tRNA gene sequence
GGTGGGGTGCGAGAGCGGTTGAATCGGGCAGTTTTGAAAACTGCTATACCTGTAAAGGTA
TCGTGAGTTCGAATCTCACCCCCACCGCTA
Downstream region at tRNA end position
ctctaaaaaa
Secondary structure (Cloverleaf model)
>WENV170020433	Ser	TGA
                   t      GCTA ctctaaaaaa
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C T C     A
      C G A        G      | | | | |     G
    G       G A G C       G T G A G     C
    G         | | |                 T T
    T       A T C G
      T G A        G     TATACCTGTAAAGGTATC
                    G - C
                    C - G
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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