The detailed information of tRNA gene sequence


Sequence ID>WENV170020454
Genome IDBBPE01008287
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 2893
End posion on genome 2802
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aatgaatgtg
tRNA gene sequence 
GGAGGGATCGCATAGTGGTCTAGTGCGGCCGCCTGCTAAGCGGTTACCCTGAGAAATCGG
GGTCGTGGGTTCAAATCCCACTCCCTCCGCCA
Downstream region at tRNA end position 
gaattggatt
Secondary structure (Cloverleaf model)
>WENV170020454	Ser	GCT
                   g      GCCA gaattggatt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C A C C C     A
      T G A        C      | | | | |     A
    G       T A C G       G T G G G     C
    G       + | | |                 T T
    T       G T G C
      C T A        G     TACCCTGAGAAATCGGGGTC
                    G + T
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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