The detailed information of tRNA gene sequence


Sequence ID>WENV170020467
Genome IDBBPE01008596
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 1567
End posion on genome 1494
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tttggcacct
tRNA gene sequence 
ACGGGTGTAGCTCAACTGGTAGAGCAGCGGTCTCCAAAACCGCAGGTTGCGGGTTCGATT
CCTGCCGCCCGTGCgc
Downstream region at tRNA end position 
atcgtcctct
Secondary structure (Cloverleaf model)
>WENV170020467	Trp	CCA
                   t      GCgc atcgtcctct
                     A - T
                     C - G
                     G - C
                     G - C
                     G - C
                     T + G
                     G - C          T T
                    T     C G T C C     A
      C A A        A      | | + | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTT
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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