The detailed information of tRNA gene sequence


Sequence ID>WENV170020470
Genome IDBBPE01008729
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 468
End posion on genome 397
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
gttgtcctgc
tRNA gene sequence 
GGGGGCGTAGCTCAGCGGGAGAGCGCCCGCTTTGCAAGCGGGGGGCCGCCGGTTCGAATC
CGGCCGTCTCCAggg
Downstream region at tRNA end position 
gcccatttgg
Secondary structure (Cloverleaf model)
>WENV170020470	Ala	TGC
                   c      Aggg gcccatttgg
                     G - C
                     G - C
                     G + T
                     G - C
                     G + T
                     C - G
                     G - C          T A
                    T     C G G C C     A
        G A        A      | | | | |     G
      C     C T C G       G C C G G     C
      G     | | | |                 T T
      G     G A G C
        G A        G     GGGCC
                    C - G
                    C - G
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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