The detailed information of tRNA gene sequence


Sequence ID>WENV170020484
Genome IDBBPE01008999
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 5560
End posion on genome 5635
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position
gtcaccaatt
tRNA gene sequence
GGAGCTGTGGTGTAGCGGTTAACATGCCGGCCTGTCACGCCGGAGACCGCGGGTTCGATT
CCCGTCAGCTCCGCCA
Downstream region at tRNA end position
ttaaaaacta
Secondary structure (Cloverleaf model)
>WENV170020484	Asp	GTC
                   t      GCCA ttaaaaacta
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     T - A
                     G - C          T T
                    T     T G C C C     A
      C G A        G      + | | | |     G
    G       T G T G       G C G G G     C
    G       | | | +                 T T
    T       A C A T
      T A          G     AGACC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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