The detailed information of tRNA gene sequence


Sequence ID>WENV170020497
Genome IDBBPE01009500
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 26949
End posion on genome 27039
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gtctgagctT
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGTTGAAGGCGCAGCACTGGAAATGCTGTTTAGGGGTGACTCTA
ACGTGGGTTCGAATCCCACCCTCTCCGTCA
Downstream region at tRNA end position 
gtttgttttg
Secondary structure (Cloverleaf model)
>WENV170020497	Ser	GGA
                   T      GTCA gtttgttttg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      T G A        G     TTTAGGGGTGACTCTAAC
                    C - G
                    A - T
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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