The detailed information of tRNA gene sequence


Sequence ID>WENV170020514
Genome IDBBPE01010291
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 1362
End posion on genome 1273
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ttgcttagtg
tRNA gene sequence 
GGTGGGATGGCTGAGCGGACGAAAGCGCGGCATTGGAAATGCCGTGGGGTAGAAATATCC
TCCTGGGTTCGAATCCCAGTCCCACCGCCA
Downstream region at tRNA end position 
gttaagaaaa
Secondary structure (Cloverleaf model)
>WENV170020514	Ser	GGA
                   g      GCCA gttaagaaaa
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     G A C C C     A
      C G A        G      | | | | |     G
    G       G T C G       C T G G G     C
    G         | | |                 T T
    A       A A G C
      C G A        G     TGGGGTAGAAATATCCTC
                    C - G
                    G - C
                    G - C
                    C - G
                    A - T
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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