The detailed information of tRNA gene sequence


Sequence ID>WENV170020521
Genome IDBBPE01010416
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 14969
End posion on genome 14894
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gaaattgctT
tRNA gene sequence 
GGGGGTATGACTTAATTGGTTATAGTGTTGGTTTGTCGAATCAAAAGTTGCGGGTTCGAA
TCCCGTTACCCCCGAgt
Downstream region at tRNA end position 
ttatttttat
Secondary structure (Cloverleaf model)
>WENV170020521	Asp	GTC
                   T      GAgt ttatttttat
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     A - T          T A
                    T     T G C C C     A
      T A A        G      + | | | |     G
    T       T T C A       G C G G G     C
    G         | | |                 T T
    G       T A G T
      T T A        G     AAGTT
                    T - A
                    T - A
                    G - C
                    G + T
                    T - A
                  T       A
                  T       G
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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