The detailed information of tRNA gene sequence


Sequence ID>WENV170020523
Genome IDBBPE01010416
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 7669
End posion on genome 7595
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aataataaaC
tRNA gene sequence 
CAAGAAGTAGTTTAAAAGGTTAAAACAATGGTCTCCAAAACCATTAATAAGGGTTCGAAT
CCCTTCTTCTCTGTgc
Downstream region at tRNA end position 
ggtgtttttt
Secondary structure (Cloverleaf model)
>WENV170020523	Trp	CCA
                   C      GTgc ggtgtttttt
                     C   T
                     A   C
                     A - T
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     T T C C C     A
      A A A        A      | | | | |     G
    A       T T T G       A A G G G     C
    G       | | | |                 T T
    G       A A A C
      T T A        A     TAAT
                    A - T
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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