The detailed information of tRNA gene sequence


Sequence ID>WENV170020528
Genome IDBBPE01010849
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 4425
End posion on genome 4349
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
accgatatat
tRNA gene sequence 
CGCGGGGTGGAGCAGTACGGCAGCTCGTCGGGCTCATAACCCGAAGGTCGTGGGTTCAAA
TCCCTCCCCCGCAACCA
Downstream region at tRNA end position 
ttaatttaag
Secondary structure (Cloverleaf model)
>WENV170020528	Met	CAT
                   t      ACCA ttaatttaag
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      |   | | |     A
    A       C G A G       G T G G G     C
    C       | | | |                 T T
    G       G C T C
      G C A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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