The detailed information of tRNA gene sequence


Sequence ID>WENV170020562
Genome IDBBPE01011975
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 1030
End posion on genome 955
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tgcccgatgt
tRNA gene sequence 
AGGGGTATAGCTCAGCTGGTAGAGCGACGGTCTCCAAAACCGTAGGTCGCGGGTTCGAGC
CCTGCTGCCCCTGCCA
Downstream region at tRNA end position 
cccgaacgcg
Secondary structure (Cloverleaf model)
>WENV170020562	Trp	CCA
                   t      GCCA cccgaacgcg
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     A - T          C G
                    T     C G T C C     A
      C G A        A      | | + | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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