The detailed information of tRNA gene sequence


Sequence ID>WENV170020578
Genome IDBBPE01012859
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 6674
End posion on genome 6598
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
tacattcaac
tRNA gene sequence 
CGGGGTGTAGCGCAGCTTGGCAGCGCGTCTCGTTCGGGACGAGAAGGTCGCAGGTTCAAA
TCCTGTCACCCCGACCA
Downstream region at tRNA end position 
ttgttcctct
Secondary structure (Cloverleaf model)
>WENV170020578	Pro	CGG
                   c      ACCA ttgttcctct
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     T G T C C     A
      C G A        A      + | | | |     A
    T       C G C G       G C A G G     C
    T       | | | |                 T T
    G       G C G C
      G C A        G     AGGTC
                    T - A
                    C - G
                    T - A
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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