The detailed information of tRNA gene sequence


Sequence ID>WENV170020601
Genome IDBBPE01013841
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 1552
End posion on genome 1627
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position
gctagttgga
tRNA gene sequence
GGGGCTGTAGCTCAGCCGGGAGAGCGCCTCCTTTGCACGGAGGAGGTCAGGAGTTCGAAT
CTCCTCAGCTCCACCA
Downstream region at tRNA end position
aaccaggggc
Secondary structure (Cloverleaf model)
>WENV170020601	Ala	TGC
                   a      ACCA aaccaggggc
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     G - C          T A
                    T     T C C T C     A
      C G A        A      | | | | |     G
    C       C T C G       A G G A G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    C - G
                    C - G
                  T       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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