The detailed information of tRNA gene sequence


Sequence ID>WENV170020626
Genome IDBBPE01015118
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 1433
End posion on genome 1347
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tccctgtaac
tRNA gene sequence 
GGAGAGGTGCTGGAGTGGCCGATCAGGCGCGCCTGGAGAGCGCGTGTCGGATTTTCCGAC
CGTGGGTTCGAATCCCACCCTCTCCGCtg
Downstream region at tRNA end position 
ctaataattg
Secondary structure (Cloverleaf model)
>WENV170020626	Ser	GGA
                   c      GCtg ctaataattg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G G T C       G T G G G     C
    G       + | | |                 T T
    C       T C A G
      C G A        G     TGTCGGATTTTCCGACC
                    C - G
                    G - C
                    C - G
                    G - C
                    C - G
                  C       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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