The detailed information of tRNA gene sequence


Sequence ID>WENV170020627
Genome IDBBPE01015140
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 319
End posion on genome 393
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
gaagtaactT
tRNA gene sequence 
GCCCCTATAGCTCAGTTGGAAGAGCACCTGACTCTTAATCAGGGTGTCCCAGGTTCGAGA
CCTGGTGGGGGTATtg
Downstream region at tRNA end position 
cgagggtggc
Secondary structure (Cloverleaf model)
>WENV170020627	Lys	CTT
                   T      ATtg cgagggtggc
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     T + G
                     A - T          A G
                    T     G G T C C     A
      T G A        A      | | | | |     G
    T       C T C G       C C A G G     C
    G       | | | |                 T T
    G       G A G C
      A A          A     GTGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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