The detailed information of tRNA gene sequence


Sequence ID>WENV170020640
Genome IDBBPE01015773
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 2386
End posion on genome 2310
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
agctgcccac
tRNA gene sequence 
GGGCCTGTAGCTCAACTGGTTAGAGCAGGGCGCTCATAACGCCTTGGTTGGGGGTTCAAG
TCCCTCCGGGCCTACCA
Downstream region at tRNA end position 
cttcgcgggg
Secondary structure (Cloverleaf model)
>WENV170020640	Met	CAT
                   c      ACCA cttcgcgggg
                     G + T
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T G
                    T     C T C C C     A
      C A A        A      | + | | |     A
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGTT
                    G + T
                    G - C
                    G - C
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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