The detailed information of tRNA gene sequence


Sequence ID>WENV170020665
Genome IDBBPE01017207
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 841
End posion on genome 752
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cctgaagcgc
tRNA gene sequence 
GGAGAGGTGACGGAGTGGTCGATCGTGGCGGTCTCGAAAACCGTTGTAGGTTTGCGCCTA
CCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
cttggcttgt
Secondary structure (Cloverleaf model)
>WENV170020665	Ser	CGA
                   c      GCCA cttggcttgt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G G C A       G T G G G     C
    G       + | | |                 T T
    T       T C G T
      C G A        G     TGTAGGTTTGCGCCTACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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