The detailed information of tRNA gene sequence


Sequence ID>WENV170020686
Genome IDBBPE01018588
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 442
End posion on genome 368
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aggtatccat
tRNA gene sequence 
GGGTCATTAGCTCAAATCGGCAGAGCAGTCGCCTCCAAAGCGAAAGGTTGAGGGTTCAAT
TCCTTCATGGCCCGCac
Downstream region at tRNA end position 
ttttatgcaa
Secondary structure (Cloverleaf model)
>WENV170020686	Trp	CCA
                   t      GCac ttttatgcaa
                     G - C
                     G - C
                     G - C
                     T + G
                     C - G
                     A - T
                     T - A          T T
                    T     C T T C C     A
      A A A        A      | | + | |     A
    T       C T C G       G A G G G     C
    C       | | | |                 T T
    G       G A G C
      G C A        A     AGGTT
                    G   A
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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