The detailed information of tRNA gene sequence


Sequence ID>WENV170020691
Genome IDBBPE01018748
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 5827
End posion on genome 5751
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
atgtgcctaa
tRNA gene sequence 
GGGCGCATAGCTCAGTCGGGATGAGCGCTTGCTTCACACGCAAGAGGTCACAGGTTCGAG
CCCTGTTGCGCCCACCA
Downstream region at tRNA end position 
gcgcctaaaa
Secondary structure (Cloverleaf model)
>WENV170020691	Val	CAC
                   a      ACCA gcgcctaaaa
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     A - T          C G
                    T     T G T C C     A
      T G A        A      | | | | |     G
    C       C T C G       A C A G G     C
    G       | | | |                 T T
    G       G A G C
      G A T        G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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