The detailed information of tRNA gene sequence


Sequence ID>WENV170020716
Genome IDBBPE01020485
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 1205
End posion on genome 1294
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
aatataaaat
tRNA gene sequence 
GGTGGGGTGGCTGAGCCCGGTTTAAGGCGCCGCACTCGAAATGCGGTATGCCCGAAAGGA
CATCGTGAGTTCAAATCTCACCCCCACCGCtt
Downstream region at tRNA end position 
taaaaactat
Secondary structure (Cloverleaf model)
>WENV170020716	Ser	CGA
                   t      GCtt taaaaactat
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C T C     A
    C C G A        G      | | | | |     A
  C         G T C G       G T G A G     C
  G           + | |                 T T
  G         A G G C
    T T T A        G     TATGCCCGAAAGGACATC
                    C - G
                    C - G
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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