The detailed information of tRNA gene sequence


Sequence ID>WENV170020725
Genome IDBBPE01020945
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 549
End posion on genome 474
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
attttgtcgg
tRNA gene sequence 
CGCGGGGTGGAGCAGTTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGCAGGTTCAAGT
CCTGCCCCCGCAACCA
Downstream region at tRNA end position 
aaaaaacata
Secondary structure (Cloverleaf model)
>WENV170020725	Met	CAT
                   g      ACCA aaaaaacata
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T G
                    T     C G T C C     A
      T G A        G      | | | | |     A
    T       C G A G       G C A G G     C
    G       | | | |                 T T
    G       G C T C
      T A          G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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