The detailed information of tRNA gene sequence


Sequence ID>WENV170020744
Genome IDBBPE01022114
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 1490
End posion on genome 1415
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
nnnnnnnnnc
tRNA gene sequence 
AGGGGTATAGCTCAATTGGTAGAGTAGCGGTCTCCAAAACCGTTGGTTGTGGGTTCGAGT
CCCTCTGCCCCTGCCA
Downstream region at tRNA end position 
aaacaacaag
Secondary structure (Cloverleaf model)
>WENV170020744	Trp	CCA
                   c      GCCA aaacaacaag
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     A - T          T G
                    T     C T C C C     A
      T A A        A      |   | | |     G
    T       C T C G       G T G G G     C
    G       | | | +                 T T
    G       G A G T
      T A          A     TGGTT
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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