The detailed information of tRNA gene sequence


Sequence ID>WENV170020750
Genome IDBBPE01022820
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 83
End posion on genome 159
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
aaggcgatgc
tRNA gene sequence 
GCGGTTGTAGCTCAGTCGGTTAGAGTACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAG
CCCCGTCAACCGCGCCA
Downstream region at tRNA end position 
tcacccttcc
Secondary structure (Cloverleaf model)
>WENV170020750	Asp	GTC
                   c      GCCA tcacccttcc
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A
                     T - A
                     G - C          C G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    C       C T C G       G C G G G     C
    G       | | | +                 T T
    G       G A G T
      T T A        A     GGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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